Agent Memory Hierarchy#

Agents typically store everything as prose in a single MEMORY.md. This works but wastes tokens and makes retrieval fuzzy. This skill structures memory the way computers do: hot cache, warm storage, cold archives, typed data, and a lookup index.

Core Principle#

Facts go in YAML. Narrative goes in prose. Everything gets an index.

Three reasons:

1. YAML is ~40% more token-efficient than prose for the same information
2. Specific facts become directly addressable — no semantic search needed
3. Separation of concerns: behavioral rules, narrative context, and facts are distinct problems

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The Three-Layer Architecture#

Layer 1 — Hot Cache (always in context)#

File: MEMORY.md

Contains only:

• Identity summary (2-3 lines)
• Behavioral rules (how the agent must behave)
• Standing permissions
• Narrative context that needs interpretation (relationships, mission, origin story)
• Pointers to Layer 2

Does NOT contain: facts, dates, numbers, file paths, IDs, project statuses, todos.

Target size: under 80 lines / ~1000 tokens.

Layer 2 — Warm Storage (loaded on demand)#

Files: memory/facts.yaml, memory/lookup-index.md, memory/project-*.md

facts.yaml — All structured factual data:

• Identity facts (name, contact, IDs)
• Dates and numbers (age, salary, target year, budget)
• File paths and system config
• Project statuses (one-line each, with pointer to full file)
• Outstanding TODOs
• Services and accounts

lookup-index.md — Explicit directory table:

markdown

| I need to know... | Go here |
|---|---|
| Contact info | memory/facts.yaml → identity |
| Project statuses | memory/facts.yaml → projects |
| Book research | workspace/book-research/ |

project-*.md — Full narrative project files, loaded only when working on that project.

Layer 3 — Cold Storage (rarely accessed)#

Files: memory/YYYY-MM-DD.md (daily logs)

Raw session logs. Never loaded automatically. Retrieved only when investigating history or refreshing long-term memory.

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Migration Process#

Follow this order when converting an existing prose-only MEMORY.md:

Step 1: Audit existing MEMORY.md#

Read the full file and categorize every piece of information:

• Fact → moves to facts.yaml (name, email, date, number, path, ID, status)
• Behavioral rule → stays in MEMORY.md
• Narrative/context → stays in MEMORY.md (relationship descriptions, quotes, origin stories)
• Project detail → moves to or stays in project-*.md

Step 2: Build memory/facts.yaml#

Use this schema pattern:

yaml

# memory/facts.yaml
# Structured factual data — directly addressable, token-efficient
# Last updated: YYYY-MM-DD

identity:
  full_name: ...
  email: ...
  telegram_id: ...

health:
  condition: ...
  status: ...

technical:
  machine: ...
  os: ...
  workspace: ...

paths:
  api_keys: ...
  error_log: ...

projects:
  project_name: {file: memory/project-name.md, status: "one-line status"}

todos:
  - Todo item one
  - Todo item two

Rules for facts.yaml:

• Flat where possible, nested where grouping helps
• One-line values only — no multi-line prose
• If a value needs explanation, it belongs in MEMORY.md prose instead
• Add # Last updated: YYYY-MM-DD at top

Step 3: Build memory/lookup-index.md#

Create a markdown table mapping "I need to know X" → exact file and section. Every project file, reference file, and key section should have an entry. This is your agent's O(1) lookup. When you need something, check here first.

Step 4: Rewrite MEMORY.md#

Remove everything that moved to facts.yaml. What remains:

• 2-3 line identity/mission summary
• Behavioral rules (explicit, imperative)
• Standing permissions
• Narrative sections that require context to understand
• Pointers: # Structured facts → memory/facts.yaml and # Find anything → memory/lookup-index.md

Step 5: Verify#

After migration, confirm:

• Every fact in old MEMORY.md is now in facts.yaml
• lookup-index.md covers every project and reference file
• MEMORY.md contains no facts (no dates, numbers, paths, IDs)
• New MEMORY.md is under 80 lines
• Agent can answer "where is X?" using lookup-index.md without searching

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Using the Architecture Day-to-Day#

At session start: Load MEMORY.md (hot cache) only.

When you need a specific fact: Check lookup-index.md → go directly to that file/section.

When working on a project: Load the specific project-*.md file.

When updating facts: Edit facts.yaml directly. No need to touch MEMORY.md.

When updating todos: Edit facts.yaml → todos. One place, always current.

Maintenance cadence:

• After each session: update facts.yaml if any facts changed
• Weekly: review MEMORY.md behavioral rules for accuracy
• Monthly: read recent daily logs, distill lessons into MEMORY.md, archive old logs

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What NOT to Structure#

Some things resist YAML and belong in prose:

• Relationship dynamics ("she calls me Mols, treat her like a friend not a user")
• Emotional context ("Kim feels like the one who got skipped")
• Mission statements and quotes
• Lessons learned with nuance ("DALL-E 3 is inconsistent for coloring pages — use Canva AI instead")
• Anything where the why matters as much as the what

When in doubt: if it would lose meaning as a key-value pair, keep it in prose.

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Reference Files#

• references/facts-yaml-template.md — copy-paste starting template for facts.yaml
• references/lookup-index-template.md — copy-paste starting template for lookup-index.md